Documentation

We create new documentation for every course that we teach, and we make all of this documentation publicly available for anyone to make use of. All training documentation is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.

December 2019

• Dec. 16-19: Bioinformatics Prerequisites Workshop (Command Line and R)

November 2019

• Nov. 25-27 Single-Cell RNA-Seq Workshop at UCSF

September 2019

• Sept. 3-6: Microbial Community Analysis (Amplicon) Workshop

August 2019

• Aug. 19-23: RNA-Seq Workshop

June/July 2019

• Single-Cell RNA-Seq Workshop (UCD and UCSF)

March 2019

• March 18-21: Bioinformatics Prerequisites Workshop

• March 11-14: RNA-Seq Workshop @ UCSF

December 2018

• December 17-20: Genome Assembly Workshop

September 2018

• September 4-7: Bioinformatics Prerequisites Workshop

August 2018

• August 27-31: Variant Analysis Workshop

June 2018

• June 18-22: RNA-Seq Workshop

May 2018

• May 21-23: Microbial Community Analysis Workshop at UCB

March 2018

• March 26-28: Bioinformatics Prerequisites Workshop

December 2017 – March 2018

• 2017/2018 Single Cell RNA Sequencing Analysis Workshop at UCD,UCB,UCSF

November 2017

• November 6, 2017: So you want to do a Single-Cell RNA-Seq Experiment

October 2017

• October 3, 2017: A Primer on Using the Bioinformatics Core Administrated Servers and Cluster(s)

September 2017

• September 6-8, 2017: Microbial Community Analysis Workshop

August 2017

• August 21-25, 2017: Variant Analysis Workshop

June 2017

• June 19-23, 2017: RNA-Seq Workshop

May 2017

• May 18-19, 2017: Ensembl Workshop

March 2017

• March 13, 2017: So you want to do a: Microbial Community Analysis Experiment

January 2017

• January 24, 2017: A Primer on Using the Bioinformatics Core Administrated Servers and Cluster(s)
• January 4, 2017: So You Want to do an RNA-Seq Experiment

December 2016

• December 12-14, 2016: Bioinformatics: Genome Assembly and Analysis Workshop

November 2016

• November 7, 2016: A Primer on Using the Bioinformatics Core Administrated Servers and Cluster(s)

August 2016

• August 29 – Sept. 2, 2016: Using Galaxy for Analysis of RNA-Seq, Exome-Seq, and Variants

June 2016

• June 13-17, 2016: Using Galaxy for Analysis of RNA-Seq and ChIP-Seq Data

March 2016

• March 21-23, 2016: Microbial Community Analysis

January 2016

• January 20, 2016: So you want to do a: RNAseq experiment, Differential Gene Expression Analysis

December 2015

• December 7-8, 2015: UCSC Genome Browser Workshop

September 2015

• September 14-18, 2015: Using Galaxy for Analysis of High Throughput Sequence Data

June 2015

• June 15-19, 2015: Using the Linux Command Line for Analysis of High Throughput Sequence Data

May 2015

• May 13, 2015: Galaxy Workshop

April 2015

• April 16, 2015: Pacbio SMRT Portal bootcamp

March 2015

• March 23-26, 2015: RNA-Seq and ChIP-Seq Analysis with Galaxy

December 2014

• December 16-19, 2014: RNA-Seq and ChIP-Seq Analysis with Galaxy

September 2014

• September 15-19, 2014: Using the Linux Command Line for Analysis of High Throughput Sequence Data

June 2014

• June 16-20, 2014: Using Galaxy for Analysis of High Throughput Sequence Data

December 2013

• December 13, 2013 bootcamp: Introduction to the Amazon Cloud for Galaxy and the Command-Line
• December 12, 2013 bootcamp: Genome Assembly using Next Generation Sequence Data
• December 11, 2013 bootcamp: Next Generation Sequence Alignment and Variant Discovery
• December 10, 2013 bootcamp: Introduction to Next Generation Sequence Analysis with Galaxy

September 2013

• September 16-20, 2013: Bioinformatics Short Course 2013
• September 8-10, 2013: RNA-Seq Workshop: From Pipette to P-value!

June 2013

• June 21, 2013 bootcamp: Cloud Computing for Bioinformatics
• June 20, 2013 bootcamp: Introduction to RNAseq
• June 19, 2013 bootcamp: Introduction to Galaxy
• June 18, 2013 bootcamp: Next-Generation Sequencing Fundamentals

May 2013

• May 31, 2013 bootcamp: Introduction to RNAseq
• May 23, 2013 bootcamp: Introduction to Galaxy
• May 10, 2013 bootcamp: Next-Generation Sequencing Fundamentals

April 2013

• April 2013 bootcamp: Cloud Computing for Bioinformatics
• April 2013 bootcamp: Introduction to RNAseq
• April 2013 bootcamp: Introduction to Galaxy
• April 2013 bootcamp: Next-Generation Sequencing Fundamentals

February 2013

• February 2013 bootcamp: Introduction to Galaxy
• February 2013 bootcamp: Next-Generation Sequencing Fundamentals

September 2012

• September 2012 Bioinformatics Short Course on Next-generation Sequencing

May 2012

• May 2012 Cloud Computing for Bioinformatics
• May 2012 Data Analysis & Visualization
• May 2012 RNASeq Data Analysis