Registration is now open for the Aug 29 – Sept 2, 2016 workshop: Using Galaxy for Analysis of RNA-Seq, Exome-Seq, and Variants For more information and registration, go to: https://registration.genomecenter.ucdavis.edu/events/Aug_2016_Bioinformatics_Galaxy_Workshop/
Posts Categorized: Training
June 2016 Galaxy RNA-Seq and ChIP-Seq Workshop
Registration is now open for the June 13-17, 2016 workshop: Using Galaxy for Analysis of RNA-Seq and ChIP-Seq Data For more information and registration, go to: https://registration.genomecenter.ucdavis.edu/events/June_2016_Bioinformatics_Galaxy_Workshop/
Microbial Community Analysis, March 21-23, 2016
Registration is now open for our new Microbial Community Analysis workshop, which will cover amplicon community profiling, as well shotgun metagenomics/transcriptomics. With high-throughput sequencing (HTS) of entire microbial communities we are rapidly advancing our understanding of the composition and functional content of microbial communities involved in climate change, environmental pollution, human health, biotechnology, etc. Using… Read more »
2016 Bioinformatics Training Program Preview
We are planning 3-4 workshops this year including: March 21-24: Using Command-Line for Analysis of Community Profiling/Metagenomics Experiments (More info and registration announcement coming soon!) June 13-17: Using Galaxy For Analysis of High Throughput Sequence Data* Aug 29-Sept 2: Using Galaxy For Analysis of High Throughput Sequence Data* December TBA: Using Command-Line for Analysis of… Read more »
(Jan 20, 2016) So you want to do a: RNAseq experiment, Differential Gene Expression Analysis
Jan. 20, 2016, 1 p.m. – Jan. 20, 2016, 3 p.m. The start of a series of new workshops discussing experimental approaches and concerns from sample to interpretation. The first in the series is RNAseq, specifically Differential Gene Expression Analysis. The workshop is intended for those who are interested in and are in the planning… Read more »
UCSC Genome Browser Workshop, December 7-8, 2015
This workshop is co-hosted by the Bioinformatics Training Program and the Data Intensive Biology Training Program. Instructors: Dr. Robert Kuhn and Angie Hinrichs, UCSC If you are a UC Davis School of Veterinary Medicine student or affiliate and would like to register, please contact Dr. C. Titus Brown (ctbrown@ucdavis.edu). Otherwise, click to register: Register… Read more »
Using Galaxy for Analysis of High Throughput Sequence Data, September 14-18, 2015
Waitlist What will be covered? This workshop covers modern high throughput sequencing technologies, applications, and ancillary topics, including: Illumina HiSeq / MiSeq, and PacBio RS technologies Read Quality Assessment & Improvement ChIP-Seq Analysis SNP and indel discovery RNA-Seq differential expression analysis Experimental design Genome assembly Hardware and software considerations Cloud Computing We will present a… Read more »
Using the Linux Command Line for Analysis of High Throughput Sequence Data, June 15-19, 2015
Register What will be covered? This workshop covers modern high throughput sequencing technologies, applications, and ancillary topics, including: Illumina HiSeq / MiSeq, and PacBio RS technologies Read Quality Assessment & Improvement Genome assembly SNP and indel discovery RNA-Seq differential expression analysis Experimental design Hardware and software considerations Cloud Computing We will present a rich collection… Read more »
2015 Bioinformatics Training Schedule Announced
The Bioinformatics Core is pleased to announce three training opportunities which will be held at UC Davis in 2015: March 23-26: RNA-Seq and ChIP-Seq Analysis with Galaxy June 15-19: Using the Linux Command Line for Analysis of High Throughput Sequence Data September 14-18: Using Galaxy for Analysis of High Throughput Sequence Data Registration is now… Read more »
RNA-Seq and ChIP-Seq Analysis with Galaxy, March 23-26, 2015
What will be covered? … This workshop will focus on the design and analysis of two powerful experimental paradigms: RNA-Seq for expression profiling, and ChIP-Seq to assess genomic DNA binding sites. We will use Illumina data for hands-on exercises, and perform analyses using the popular Galaxy platform (http://usegalaxy.org) running on the Amazon Cloud (http://aws.amazon.com/). What… Read more »